Apparently the default Mac OS X Firefox theme is squishing the icons a little bit. The different OSes have varying theme characteristics in the current version of Firefox. This is a pain in the ass for development, especially because I don’t own a Mac. I had about 200 beta testers for a month or so, but nobody noticed the subtle issue. I’m looking into a way to fix it at the moment.
Some people also do not like the light flag border when using a dark theme. I tested this before the release and thought it looked OK, but I don’t use dark themes personally. The 5.0.1 update has an updated border that will use a dark border under dark themes, so it will be less noticeable.
Also previously noted is that if you use a lightweight theme (wallpaper/skin/Persona) under Linux (or possibly some other OSes, but not Windows) then Firefox applies an unfocused effect to your interface. If you click the address bar and the flag icon gets lighter, it’s because of your theme. Under Windows this only affects the background and not the icon. There is no way to override this effect for just Flagfox; it affects everything, including search plugin icons. I was well aware of this effect before the release, as I am on Linux myself, however I don’t personally have an issue with it. If you do, you can disable it with the following userChrome.css:
#urlbar:-moz-lwtheme:not([focused="true"]), .searchbar-textbox:-moz-lwtheme:not([focused="true"]) { opacity: 1 !important; }
Update:
A fix for the border issue has been released in Flagfox 5.0.1.